| Internal ID | 17797000 | Source Database | TransTermHP TERM 42 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 42
|
| Sequence |
GGCCGGCCTGTCGCTTCTCGCGCAGGTCGGCC Look for more occurrences |
| Start | 229778 |
| End | 229809 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas sp. LAMO17WK12:I4 D885DRAFT_scaffold00005.5_C, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GCTAAGCACCCTCAA(5' tail) GGCCGGCCTGTCGC(5' stem) TTCTC(loop) GCG-CAGGTCGGCC(3' stem) TTGTGCTGCCTGAAA(3' tail). Confidence: 90. gap 1, opp_overlap 229771 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|