| Internal ID | 17795119 | Source Database | TransTermHP TERM 31 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 31
|
| Sequence |
CATAGGGCCCCATCGCGAGCAAGCTCGCGATGGGGCCACTGAA Look for more occurrences |
| Start | 238242 |
| End | 238284 |
| Strand | - |
| Genomic Context | Located within gene [D882_RS0113625] |
| Replicon | Pseudomonas sp. URMO17WK12:I12 D882DRAFT_scaffold00008.8_C, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TTTTTATGGGTGAAA(5' tail) TTCAGTGGCCCCATCGCGAG(5' stem) CTTG(loop) CTCGCGATGGGGCC-CTATG(3' stem) GGCGATAGAGATGCG(3' tail). Confidence: 95. gap 1, overlap 238243 238246 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|