Motif View

Internal ID 17794755
Source Database TransTermHP TERM 70
Feature Type terminator
Name
Rho-independent transcription terminator TERM 70
Sequence CCCCGCTCATCCAGCGGGG
Look for more occurrences
Start 376022
End 376040
Strand -
Genomic Context
Replicon Pseudomonas sp. URMO17WK12:I12 D882DRAFT_scaffold00003.3_C, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCAGGCAAAAAAAAA(5' tail) CCCCGCT(5' stem) GGATG(loop) AGCGGGG(3' stem) TTTTCTATTACGCCA(3' tail). Confidence: 100. opp_overlap 376022 376017

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685