Motif View

Internal ID 17788724
Source Database TransTermHP TERM 910
Feature Type terminator
Name
Rho-independent transcription terminator TERM 910
Sequence GCCCACCGAAAGGTGGGC
Look for more occurrences
Start 4648558
End 4648575
Strand +
Genomic Context
Replicon Pseudomonas fluorescens Q2-87 chromosome, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ATGCTGAAACACGAA(5' tail) GCCCACC(5' stem) GAAA(loop) GGTGGGC(3' stem) TTTTTTGTTTGTGTC(3' tail). Confidence: 100. opp_overlap 4648552 4648558

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685