| Internal ID | 17786456 | Source Database | TransTermHP TERM 67 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 67
|
| Sequence |
CTTGAGCCCCCCTGTGGCGAGGGAGCAAGCTCCCACACCACAGGGGGGGGCGAA Look for more occurrences |
| Start | 194826 |
| End | 194879 |
| Strand | - |
| Genomic Context | Located within gene [D470_RS0113560] |
| Replicon | Pseudomonas umsongensis 20MFCvi1.1 D470DRAFT_scaffold00005.5, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AACATTTGACCGAAA(5' tail) TTCGCCCCCCCCTGTGGTGTGGGAG(5' stem) CTTG(loop) CTCCCTCGCCACAGGGGGGCTCAAG(3' stem) GGCGGAACTGGCTGG(3' tail). Confidence: 100. opp_overlap 194828, overlap 194827 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|