| Internal ID | 17786097 | Source Database | TransTermHP TERM 135 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 135
|
| Sequence |
TGAAGGCCGCACCCCGCAAGGGTCGCGGCCTTCA Look for more occurrences |
| Start | 586598 |
| End | 586631 |
| Strand | - |
| Genomic Context | Located within gene [D470_RS0106355] |
| Replicon | Pseudomonas umsongensis 20MFCvi1.1 D470DRAFT_scaffold00002.2, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CAAGCCCCAAAAAGC(5' tail) TGAAGGCCGCGACCC(5' stem) TTGCG(loop) GGGT-GCGGCCTTCA(3' stem) CCTTTTCATTTAAAC(3' tail). Confidence: 90. gap 1, opp_overlap 586598 586596 586591, overlap 586596 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|