| Internal ID | 17785043 | Source Database | TransTermHP TERM 116 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 116
|
| Sequence |
TCGCAGCTCAAGAAAAGCCCGGCTTAGGCCGGGCTTTTCTTTGTCTGCGA Look for more occurrences |
| Start | 348748 |
| End | 348797 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas mandelii 36MFCvi1.1 F626DRAFT_scaffold00002.2, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AGCTAAGTAATTAGC(5' tail) TCGCAGCTCAAGAAAAGCCCGGC(5' stem) TTAG(loop) GCCGGGCTTTTCTTTGTCTGCGA(3' stem) TTTGGTGAAGTGGGG(3' tail). Confidence: 100. opp_overlap 348731 348746 348764, overlap 348759 348764 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|