| Internal ID | 17784289 |
| Source Database | TransTermHP TERM 89 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 89
|
| Sequence |
GCAACGGCAAGTGCAATGGGTGGGATAGATAATCCACCTAATTGAACTTGCCGTTTGC Look for more occurrences |
| Start | 282017 |
| End | 282074 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas caeni DSM 24390 H591DRAFT_scaffold00001.1_C, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TAATCCATATAAACA(5' tail) GCAAACGGCAAGTTCAATTAGGTGGATT(5' stem) ATCT(loop) ATCCCACCCA-TTGCACTTGCCG-TTGC(3' stem) CTATACGACTACGAA(3' tail). Confidence: 90. gap 2, opp_overlap 282022, overlap 282022 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|