| Internal ID | 17783823 | Source Database | TransTermHP TERM 12 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 12
|
| Sequence |
GACGCAACGCCCCTCCTGCTGGTCAGGCGGGGCGTTGTGCC Look for more occurrences |
| Start | 78541 |
| End | 78581 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas sp. URIL14HWK12:I4 H025DRAFT_scaffold00011.11_C, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AAAAAGTCTCCAACA(5' tail) GGCACAACGCCCCGCCTG(5' stem) ACCAG(loop) CAGGAGGGGCGTTGCGTC(3' stem) AGTTCAAAGGGTAAG(3' tail). Confidence: 100. opp_overlap 78543 78548, overlap 78531 78532 78548 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|