Motif View

Internal ID 17783251
Source Database TransTermHP TERM 134
Feature Type terminator
Name
Rho-independent transcription terminator TERM 134
Sequence TTCAATCTTGAA
Look for more occurrences
Start 555387
End 555398
Strand +
Genomic Context
Replicon Pseudomonas sp. LAIL14HWK12:I7 D886DRAFT_scaffold00002.2, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCATTCTTGTACAAC(5' tail) TTCA(5' stem) ATCT(loop) TGAA(3' stem) TTTTTTTATTAAGTC(3' tail). Confidence: 95. opp_overlap 555387

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685