| Internal ID | 17783138 | Source Database | TransTermHP TERM 2 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 2
|
| Sequence |
CTGAAACGTACTGGGGCCGCATTGCGGCCCCGTACGTTACCAG Look for more occurrences |
| Start | 1222 |
| End | 1264 |
| Strand | - |
| Genomic Context | Located within gene [D886_RS0117980] |
| Replicon | Pseudomonas sp. LAIL14HWK12:I7 D886DRAFT_scaffold00017.17_C, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GGCGGTGGAAAACTA(5' tail) CTGGTAACGTAC-GGGGCCGC(5' stem) AAT(loop) GCGGCCCCAGTACGTTT-CAG(3' stem) GGCAAGCGATTCTGG(3' tail). Confidence: 90. opp_overlap 1229, overlap 1219 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|