| Internal ID | 17781844 | Source Database | TransTermHP TERM 108 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 108
|
| Sequence |
TGAAGGCCGCCACCCTTGCGGGGTGCGGCCTTCA Look for more occurrences |
| Start | 493949 |
| End | 493982 |
| Strand | + |
| Genomic Context | Located within gene [G368_RS0115535] |
| Replicon | Pseudomonas sp. 45MFCol3.1 G368DRAFT_scaffold00003.3, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CAAGCCCCAAAAAGC(5' tail) TGAAGGCCGCCACCCT(5' stem) TGC(loop) GGGGTG-CGGCCTTCA(3' stem) CTTTTCATTTAAACG(3' tail). Confidence: 100. gap 1, opp_overlap 493947 493948 493949, overlap 493948 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|