| Internal ID | 17781843 | Source Database | TransTermHP TERM 107 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 107
|
| Sequence |
GTGAAGGCCGCACCCCGCAAGGGTGGCGGCCTTCAG Look for more occurrences |
| Start | 493948 |
| End | 493983 |
| Strand | - |
| Genomic Context | Located within gene [G368_RS0115535] |
| Replicon | Pseudomonas sp. 45MFCol3.1 G368DRAFT_scaffold00003.3, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | ACAAGCCCCAAAAAG(5' tail) CTGAAGGCCGCCACCC(5' stem) TTGCG(loop) GGGTG-CGGCCTTCAC(3' stem) TTTTCATTTAAACGC(3' tail). Confidence: 95. gap 1, opp_overlap 493948 493949, overlap 493947 493949 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|