| Internal ID | 17781440 | Source Database | TransTermHP TERM 139 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 139
|
| Sequence |
GATCGCAGCCTTCGGCAGCTCCTACGCGCCTGCGGGCGCTGCCGAAGGCTGCGATC Look for more occurrences |
| Start | 357808 |
| End | 357863 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas sp. 45MFCol3.1 G368DRAFT_scaffold00001.1, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | ATTTTAAAATCAAAA(5' tail) GATCGCAGCCTTCGGCAGCGCCCGCA(5' stem) GGCG(loop) CGTAGGAGCTGCCGAAGGCTGCGATC(3' stem) TTTTGCCTTTGATTT(3' tail). Confidence: 100. opp_overlap 357808 357858 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|