| Internal ID | 17780898 |
| Source Database | TransTermHP TERM 12 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 12
|
| Sequence |
GCAAGCGGCAAGCTCCATGGGATGGCCTGGCCATCGACTGGGCTTGCCGTTTGG Look for more occurrences |
| Start | 47327 |
| End | 47380 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas thermotolerans DSM 14292 H165DRAFT_scaffold00003.3, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CATCAAACTGCAAAA(5' tail) CCAAACGGCAAGC-CCAGTCGATGGC(5' stem) CAG(loop) GCCATCCCATGGAGCTTGCCGCTTGC(3' stem) TGTCTGCCTCCAGGC(3' tail). Confidence: 91. gap 1, opp_overlap 47327 47331 47332, overlap 47328 47332 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|