| Internal ID | 17780257 | Source Database | TransTermHP TERM 21 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 21
|
| Sequence |
ACAGAGGGCCTGACGCTAGTGTTAAGACACTCGCGCCAGGCCCTTCTGG Look for more occurrences |
| Start | 115836 |
| End | 115884 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas vranovensis DSM 16006 H621DRAFT_scaffold00014.14, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TTGGCAATGGCCAAA(5' tail) CCAGAAGGGCCTGGCGCGAGTGT(5' stem) CTTA(loop) ACACTAGCGTCAGGCCCT-CTGT(3' stem) CTGTGAAGTCACAAT(3' tail). Confidence: 91. gap 1, opp_overlap 115837 115842, overlap 115837 115842 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|