| Internal ID | 17779228 | Source Database | TransTermHP TERM 9 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 9
|
| Sequence |
GCCACACACAAGAACGCCGGGCAATGCCCGGCGTTCTTGTGTGTGCGC Look for more occurrences |
| Start | 35580 |
| End | 35627 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas vranovensis DSM 16006 H621DRAFT_scaffold00001.1_C, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TGGGCTGTCATTCAA(5' tail) GCGCACACACAAGAACGCCGGGC(5' stem) ATT(loop) GCCCGGCGTTCTTGTGTGTG-GC(3' stem) GATCAGCCGCGGTTG(3' tail). Confidence: 100. gap 1, opp_overlap 35589 35592 35595, overlap 35549 35592 35595 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|