| Internal ID | 17768850 | Source Database | TransTermHP TERM 22 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 22
|
| Sequence |
CGGCCTGGCACCGAGAGGTGCCAGGCCG Look for more occurrences |
| Start | 153770 |
| End | 153797 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas sp. CF149 soap_scaffs_149.Contig44.2, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CCGCTAGACCCAAAA(5' tail) CGGCCTGGCACC(5' stem) GAGA(loop) GGTGCCAGGCCG(3' stem) TTTTTTTGCGTCCCA(3' tail). Confidence: 100. opp_overlap 153770 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|