| Internal ID | 17768137 | Source Database | TransTermHP TERM 27 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 27
|
| Sequence |
GCACCGCCCGCAGGGAGAGGCGACTCCCTGCGGGAGCGGGC Look for more occurrences |
| Start | 56162 |
| End | 56202 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas sp. CF149 soap_scaffs_149.Contig10, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CAGCACTAAAAATCC(5' tail) GCAC-CGCCCGCAGGGAG(5' stem) AGGCGA(loop) CTCCCTGCGGGAGCGGGC(3' stem) TTGCTCGCGATGCAA(3' tail). Confidence: 95. gap 1, opp_overlap 56160 56161 56159 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|