Motif View

Internal ID 17762734
Source Database TransTermHP TERM 25
Feature Type terminator
Name
Rho-independent transcription terminator TERM 25
Sequence GGGCGCTTCGGCGCCC
Look for more occurrences
Start 83101
End 83116
Strand +
Genomic Context
Replicon Pseudomonas stutzeri T13 contig000031, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GAACGGTGATCGTGA(5' tail) GGGCGC(5' stem) TTCG(loop) GCGCCC(3' stem) TTTTTTCATGGCGGC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685