Motif View

Internal ID 17759188
Source Database TransTermHP TERM 10
Feature Type terminator
Name
Rho-independent transcription terminator TERM 10
Sequence GCTTGGCGTGATCACGCCAAGC
Look for more occurrences
Start 38645
End 38666
Strand +
Genomic Context
Replicon Pseudomonas sp. S9 Contig11, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCCGGGGGCAACCAG(5' tail) GCTTGGCGT(5' stem) GATC(loop) ACGCCAAGC(3' stem) TGTTCAGCAACGCTG(3' tail). Confidence: 93. opp_overlap 38644

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685