Motif View

Internal ID 17758989
Source Database TransTermHP TERM 103
Feature Type terminator
Name
Rho-independent transcription terminator TERM 103
Sequence GCTGGAAGTGGGTTTACCCCACTTCCAGC
Look for more occurrences
Start 352993
End 353021
Strand +
Genomic Context
Replicon Pseudomonas sp. S9 Contig5, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TAGCTGAATGCTGAA(5' tail) GCTGGAAGTGGG(5' stem) TTTAC(loop) CCCACTTCCAGC(3' stem) TTTTGTGTTTCAGCT(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685