Motif View

Internal ID 17758779
Source Database TransTermHP TERM 73
Feature Type terminator
Name
Rho-independent transcription terminator TERM 73
Sequence GGTTCGGCCAGATTTACTGGCCGAACC
Look for more occurrences
Start 315592
End 315618
Strand +
Genomic Context
Replicon Pseudomonas sp. S9 Contig3, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AACGATTGTGTAAAA(5' tail) GGTTCGGCCAG(5' stem) ATTTA(loop) CTGGCCGAACC(3' stem) TCATTCTGAAAGGCT(3' tail). Confidence: 95. opp_overlap 315592, overlap 315589

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685