Motif View

Internal ID 17756426
Source Database TransTermHP TERM 69
Feature Type terminator
Name
Rho-independent transcription terminator TERM 69
Sequence GGTCAGTGCCTGTCGGCCCTGGCC
Look for more occurrences
Start 244950
End 244973
Strand -
Genomic Context
Replicon Pseudomonas sp. PAMC 25886 ctg7180000004560, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCGCGAACAAAACAA(5' tail) GGCCAGGGCC(5' stem) GACA(loop) GGCACTGACC(3' stem) TATAAAAAACATAGG(3' tail). Confidence: 93. overlap 244947

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685