| Internal ID | 17755905 | Source Database | TransTermHP TERM 11 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 11
|
| Sequence |
CAACAAAAAACCCGCACCAGGCGGGTTTTTTGTGTG Look for more occurrences |
| Start | 38343 |
| End | 38378 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas sp. PAMC 25886 ctg7180000004501, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TCCACAAATTCCAGA(5' tail) CA-ACAAAAAACCCGC(5' stem) ACCAG(loop) GCGGGTTTTTTGTGTG(3' stem) TTTCAGATGACGTTT(3' tail). Confidence: 95. gap 1, opp_overlap 38346 38353, overlap 38346 38353 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|