| Internal ID | 17755827 | Source Database | TransTermHP TERM 28 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 28
|
| Sequence |
TCCGGCGCAGCGCTTCCTCGGGAAGGCTGCGCCGAA Look for more occurrences |
| Start | 117509 |
| End | 117544 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas sp. PAMC 25886 ctg7180000004496, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TCATCGAGTAAAACA(5' tail) TCCGGCGCAGCGCTTCC(5' stem) TCG(loop) GGAAG-GCTGCGCCGAA(3' stem) TTGGTTCTTGGAAGG(3' tail). Confidence: 100. gap 1, opp_overlap 117509 117507, overlap 117506 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|