Motif View

Internal ID 17753683
Source Database TransTermHP TERM 441
Feature Type terminator
Name
Rho-independent transcription terminator TERM 441
Sequence GACCTCGCCGAGGCATCGGCGGGGTC
Look for more occurrences
Start 1904942
End 1904967
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO579 Contig01, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GAGTCGAGACGCGAA(5' tail) GACCTCGCCGA(5' stem) GGCA(loop) TCGGCGGGGTC(3' stem) TTTCTCCGAAAGAGG(3' tail). Confidence: 100. opp_overlap 1904944

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685