| Internal ID | 17743585 |
| Source Database | TransTermHP TERM 1228 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1228
|
| Sequence |
CGAAAAAGCCCGGCATTCGCCGGGCTTTTTCG Look for more occurrences |
| Start | 5247755 |
| End | 5247786 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa 19BR 19BR chromosome, whole genome shotgun sequence, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GTCTGATCAGAACCA(5' tail) CGAAAAAGCCCGGC(5' stem) ATTC(loop) GCCGGGCTTTTTCG(3' stem) TTTTAATCTGCGGTC(3' tail). Confidence: 100. opp_overlap 5247755 5247752 5247762, overlap 5247762 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|