Motif View

Internal ID 17743294
Source Database TransTermHP TERM 733
Feature Type terminator
Name
Rho-independent transcription terminator TERM 733
Sequence CCCCGGCTCCGGCCGGGG
Look for more occurrences
Start 3239369
End 3239386
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa 19BR 19BR chromosome, whole genome shotgun sequence, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCCGCCTCGCGAAAA(5' tail) CCCCGGC(5' stem) TCCG(loop) GCCGGGG(3' stem) TTTTTCATTTCCGGA(3' tail). Confidence: 100. opp_overlap 3239369

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685