Motif View

Internal ID 17743149
Source Database TransTermHP TERM 495
Feature Type terminator
Name
Rho-independent transcription terminator TERM 495
Sequence CGACGAAAGGCGCCCACGGGCGCCTTTTTTCG
Look for more occurrences
Start 2025911
End 2025942
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa 19BR 19BR chromosome, whole genome shotgun sequence, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTCGAATAAAGGAAA(5' tail) CGAAAAAAGGCGCC(5' stem) CGTG(loop) GGCGCCTTTCGTCG(3' stem) TATGGAACGGCTCAG(3' tail). Confidence: 100. opp_overlap 2025919, overlap 2025919

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685