Motif View

Internal ID 17742943
Source Database TransTermHP TERM 166
Feature Type terminator
Name
Rho-independent transcription terminator TERM 166
Sequence CCCCGGCCTGGTTGCCGGGG
Look for more occurrences
Start 738519
End 738538
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa 19BR 19BR chromosome, whole genome shotgun sequence, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCCGACGACGATTG(5' tail) CCCCGGC(5' stem) CTGGTT(loop) GCCGGGG(3' stem) TTTTCTGTCTTGCGC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685