Motif View

Internal ID 17742844
Source Database TransTermHP TERM 13
Feature Type terminator
Name
Rho-independent transcription terminator TERM 13
Sequence CGGACACTCCCAAGGGGTGTCCG
Look for more occurrences
Start 66036
End 66058
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa 19BR 19BR chromosome, whole genome shotgun sequence, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGTCGACGGCAGAGA(5' tail) CGGACACTCC(5' stem) CAA(loop) GGGGTGTCCG(3' stem) TTTTCATTTGCGCCG(3' tail). Confidence: 100. opp_overlap 66036

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685