Motif View

Internal ID 17741893
Source Database TransTermHP TERM 168
Feature Type terminator
Name
Rho-independent transcription terminator TERM 168
Sequence CCCCGGCCTGGTTGCCGGGG
Look for more occurrences
Start 738698
End 738717
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa 213BR 213BR chromosome, whole genome shotgun sequence, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCCGACGACGATTG(5' tail) CCCCGGC(5' stem) CTGGTT(loop) GCCGGGG(3' stem) TTTTCTGTCTTGCGC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685