| Internal ID | 17741684 | Source Database | TransTermHP TERM 1579 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1579
|
| Sequence |
CAAGAAAACCGGCCTTAGAGCCGGTTTTTTTG Look for more occurrences |
| Start | 6313139 |
| End | 6313170 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa 9BR 9BRScaffold1, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GCAGTCTCGGAACCC(5' tail) CAAGAAAACCGGC(5' stem) CTTAGA(loop) GCCGGTTTTTTTG(3' stem) TTTCTAGCGGTTCCA(3' tail). Confidence: 91. opp_overlap 6313147, overlap 6313147 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|