Motif View

Internal ID 17741213
Source Database TransTermHP TERM 824
Feature Type terminator
Name
Rho-independent transcription terminator TERM 824
Sequence CCCGCGTACCCGCAAGGGACGCGGG
Look for more occurrences
Start 3564760
End 3564784
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa 9BR 9BRScaffold1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCGGGCATGAAAAAA(5' tail) CCCGCGT-CCC(5' stem) TTGC(loop) GGGTACGCGGG(3' stem) CCTCTGCCTCGACGC(3' tail). Confidence: 100. gap 1, opp_overlap 3564718

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685