| Internal ID | 17741062 | Source Database | TransTermHP TERM 580 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 580
|
| Sequence |
TGGGGCGGAGCAGGGAGGCATCCGCCCCA Look for more occurrences |
| Start | 2436515 |
| End | 2436543 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa 9BR 9BRScaffold1, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GCGCAGTGAAGTGAA(5' tail) TGGGGCGGA-GC(5' stem) AGGGAG(loop) GCATCCGCCCCA(3' stem) TTTTCATGCCCAGGA(3' tail). Confidence: 95. gap 1, opp_overlap 2436515 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|