Motif View

Internal ID 17740931
Source Database TransTermHP TERM 370
Feature Type terminator
Name
Rho-independent transcription terminator TERM 370
Sequence GCCCCGCCGGTCGATTGGCGGGGC
Look for more occurrences
Start 1506362
End 1506385
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa 9BR 9BRScaffold1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CACGCTTTAGGGAAA(5' tail) GCCCCGCCGG(5' stem) TCGA(loop) TTGGCGGGGC(3' stem) TTTTTTTTGTCTGCG(3' tail). Confidence: 100. opp_overlap 1506362

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685