| Internal ID | 17736765 | Source Database | TransTermHP TERM 49 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 49
|
| Sequence |
TCAAACGAAGAAGCCCGGCATTGCTGCCGGGCTTCTTCGCTTCA Look for more occurrences |
| Start | 199762 |
| End | 199805 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas stutzeri B1SMN1 contig00003, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GAAATAACCGATAAA(5' tail) TGAAGCGAAGAAGCCCGGCA(5' stem) GCAA(loop) TGCCGGGCTTCTTCGTTTGA(3' stem) TGGCCGAAAAGCCAG(3' tail). Confidence: 100. opp_overlap 199767 199774, overlap 199766 199767 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|