Motif View

Internal ID 17705302
Source Database TransTermHP TERM 189
Feature Type terminator
Name
Rho-independent transcription terminator TERM 189
Sequence GGGCATGGAACTCCATTTCCATGCCC
Look for more occurrences
Start 736093
End 736118
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa NCAIM B.001380 K260DRAFT_scf7180000000061_quiver.5_C, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGGGATAAAAACAAA(5' tail) GGGCATGGAA(5' stem) ATGGAG(loop) TTCCATGCCC(3' stem) TTGTCGGCTGAATGA(3' tail). Confidence: 100. opp_overlap 736093

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685