Motif View

Internal ID 17703176
Source Database TransTermHP TERM 14
Feature Type terminator
Name
Rho-independent transcription terminator TERM 14
Sequence TGCCAGCGGGGCGCGAGAGCGACGTCCCGCTGGCC
Look for more occurrences
Start 70881
End 70915
Strand -
Genomic Context
Replicon Pseudomonas fulva NBRC 16637 = DSM 17717 Q382DRAFT_scaffold00015.15, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTGCAATGTAAAAAA(5' tail) GGCCAGCGGGACGTCG(5' stem) CTCT(loop) CG-CGCCCCGCTGGCA(3' stem) GAGGTAAAGCCTTTA(3' tail). Confidence: 100. gap 1, overlap 70882

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685