Motif View

Internal ID 17703174
Source Database TransTermHP TERM 12
Feature Type terminator
Name
Rho-independent transcription terminator TERM 12
Sequence CCCGCCGAAGCGGG
Look for more occurrences
Start 69444
End 69457
Strand +
Genomic Context
Replicon Pseudomonas fulva NBRC 16637 = DSM 17717 Q382DRAFT_scaffold00015.15, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCTGACATGAAAAAA(5' tail) CCCGC(5' stem) CGAA(loop) GCGGG(3' stem) TTTTTTTTAAAGCCA(3' tail). Confidence: 100. opp_overlap 69444

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685