Motif View

Internal ID 17703061
Source Database TransTermHP TERM 13
Feature Type terminator
Name
Rho-independent transcription terminator TERM 13
Sequence GGGCTCCCGCGGGAGCCC
Look for more occurrences
Start 37577
End 37594
Strand +
Genomic Context
Replicon Pseudomonas fulva NBRC 16637 = DSM 17717 Q382DRAFT_scaffold00024.24_C, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTAGCGCTTCACAAA(5' tail) GGGCTCC(5' stem) CGCG(loop) GGAGCCC(3' stem) TTTTTTTTGGATCTA(3' tail). Confidence: 100. opp_overlap 37577

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685