| Internal ID | 17702803 | Source Database | TransTermHP TERM 111 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 111
|
| Sequence |
GTGTGCCAAGCGTGACCGACCTCACTTCAAGAGTGAGGTCGTCCCTTGGCGCGC Look for more occurrences |
| Start | 509858 |
| End | 509911 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas fulva NBRC 16637 = DSM 17717 Q382DRAFT_scaffold00002.2_C, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CACCGGTATTGTAAA(5' tail) GCGCGCCAAG-G-GA-CGACCTCACTC(5' stem) TTG(loop) AAGTGAGGTCGGTCACGCTTGGCACAC(3' stem) GTTTGGTAGGCGCTA(3' tail). Confidence: 91. gap 3, opp_overlap 509857 509858 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|