Motif View

Internal ID 17702686
Source Database TransTermHP TERM 4
Feature Type terminator
Name
Rho-independent transcription terminator TERM 4
Sequence CAGGCCCGCCCCGGTGCTCGGTACGTGCGCCGGGGCGGGCCAA
Look for more occurrences
Start 34833
End 34875
Strand -
Genomic Context
Replicon Pseudomonas fulva NBRC 16637 = DSM 17717 Q382DRAFT_scaffold00001.1_C, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTTGGCGGTGAAGCA(5' tail) TTGGCCCGCCCCGGCGCACG(5' stem) TAC(loop) CGAGCACCGGGGCGGGCCTG(3' stem) CAACTGGGCGCTTAA(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685