Motif View

Internal ID 17702635
Source Database TransTermHP TERM 9
Feature Type terminator
Name
Rho-independent transcription terminator TERM 9
Sequence CGGGCCTCATCGCCGGCAAGCCCGCGCTGAGGCCCG
Look for more occurrences
Start 23702
End 23737
Strand -
Genomic Context
Replicon Pseudomonas monteilii NBRC 103158 = DSM 14164 Q381DRAFT_scaffold00005.5, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGTGTGTTAGCCAAA(5' tail) CGGGCCTCAGCGCGGG(5' stem) CTTG(loop) CCGGCGATGAGGCCCG(3' stem) GCAACATTAGCTGCG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685