| Internal ID | 17692770 | Source Database | TransTermHP TERM 65 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 65
|
| Sequence |
CCCGCTCCCATAGGGTGAGCGGTGCTGGTGAGCAACGCATCATACCTGTGGGAGCGGG Look for more occurrences |
| Start | 123409 |
| End | 123466 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas sp. URMO17WK12:I8 F639DRAFT_scaffold00005.5_C, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CCTTTCGCGGGCAGG(5' tail) CCCGCTCCCATAGG-GTGA-GCGGTGCT(5' stem) GGTG(loop) AGCAACGCATCATACCTGTGGGAGCGGG(3' stem) CTTGTCCGCGAATAA(3' tail). Confidence: 100. gap 2, overlap 123409 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|