Motif View

Internal ID 17692490
Source Database TransTermHP TERM 15
Feature Type terminator
Name
Rho-independent transcription terminator TERM 15
Sequence CGCCGCGATGATCGCGGCG
Look for more occurrences
Start 94467
End 94485
Strand +
Genomic Context
Replicon Pseudomonas syringae DSM 10604 Contig37, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCCGCACGCAAAAA(5' tail) CGCCGCGA(5' stem) TGA(loop) TCGCGGCG(3' stem) TTTTTGTAGCGGTTA(3' tail). Confidence: 100. opp_overlap 94467

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685