Motif View

Internal ID 17691669
Source Database TransTermHP TERM 207
Feature Type terminator
Name
Rho-independent transcription terminator TERM 207
Sequence CCTGCCGTAGCCTCAGCGCTGCGGCGGG
Look for more occurrences
Start 776266
End 776293
Strand +
Genomic Context
Replicon Pseudomonas sp. URHB0015 N526DRAFT_scaffold00001.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TAGGCCTGTCAGGAA(5' tail) CCTGCCGTAGC(5' stem) CTCAGC(loop) GCTGCGGCGGG(3' stem) TTTTTTATTGCCTGG(3' tail). Confidence: 100. opp_overlap 776266

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685