| Internal ID | 17690029 | Source Database | TransTermHP TERM 26 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 26
|
| Sequence |
GCGGGCAAGCCACGCTCCCACAAGGTCTGCGCAAAACCTGTGAGAGCGTGGTTGCCCGC Look for more occurrences |
| Start | 58723 |
| End | 58781 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas umsongensis UNC430CL58Col N519DRAFT_scaffold00006.6_C, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CGCGTCGTCCCCATC(5' tail) GCGGGCAAGCCACGCTCCCACAAGGTCT(5' stem) GCGCA(loop) AAACCT-GTGAGAGCGTGG-TTGCCCGC(3' stem) GATTGTTTTTTTAAG(3' tail). Confidence: 100. gap 2, opp_overlap 58735 58746, overlap 58724 58768 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|