| Internal ID | 17689895 | Source Database | TransTermHP TERM 115 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 115
|
| Sequence |
CCTGTGGGAGCGAGCCTGCTCCCACAGC Look for more occurrences |
| Start | 353966 |
| End | 353993 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas umsongensis UNC430CL58Col N519DRAFT_scaffold00004.4_C, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AGCGTCGCCACAAAA(5' tail) GCTGTGGGAGCA(5' stem) GGCT(loop) CGCTCCCACAGG(3' stem) GACTCATCTAGCCTT(3' tail). Confidence: 93. opp_overlap 353984, overlap 353952 353967 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|